Original Research

Published on 14 May 2024

Comprehensive analysis of the mitochondrial genome of Rehmannia glutinosa: insights into repeat-mediated recombinations and RNA editing-induced stop codon acquisition

in Plant Genetics, Epigenetics and Chromosome Biology

Tiexin Zeng
Yang Ni
Jingling Li
Haimei Chen
Qianqi Lu
Mei Jiang
Lijia Xu
Chang Liu
Peigen Xiao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1326387

161 views

Original Research

Accepted on 13 May 2024

Insight into chromatin compaction and spatial organization in rice interphase nuclei

in Plant Genetics, Epigenetics and Chromosome Biology

Alžběta Doležalová
Denisa Beránková
Veronika Koláčková
Eva Hribova

Frontiers in Plant Science

doi 10.3389/fpls.2024.1358760

Methods

Accepted on 07 May 2024

Establishing an optimized ATAC-seq protocol for the maize

in Plant Genetics, Epigenetics and Chromosome Biology

Jo-Wei Allison Hsieh
Pei-Yu Lin
Chi-Ting Wang
Yi-Jing Lee
Pearl Chang
Rita Jui-Hsien Lu
Pao-Yang Chen
Chung-Ju Rachel Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1370618

Review

Published on 22 Apr 2024

Gametocidal genes: from a discovery to the application in wheat breeding

in Plant Genetics, Epigenetics and Chromosome Biology

Mahmoud Said
Eszter Gaál
András Farkas
István Molnár
Jan Bartoš
Jaroslav Doležel
Adoración Cabrera
Takashi R. Endo

Frontiers in Plant Science

doi 10.3389/fpls.2024.1396553

758 views

Original Research

Published on 18 Apr 2024

Anthocyanin gene enrichment in the distal region of cotton chromosome A07: mechanisms of reproductive organ coloration

in Plant Genetics, Epigenetics and Chromosome Biology

Liuchang Zheng
Jilong Zhang
Haiyan He
Zhigang Meng
Yuan Wang
Sandui Guo
Chengzhen Liang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1381071

442 views

Original Research

Published on 15 Apr 2024

Cold stress induces rapid gene-specific changes in the levels of H3K4me3 and H3K27me3 in Arabidopsis thaliana

in Plant Genetics, Epigenetics and Chromosome Biology

Léa Faivre
Nathalie-Francesca Kinscher
Ana Belén Kuhlmann
Xiaocai Xu
Kerstin Kaufmann
Daniel Schubert

Frontiers in Plant Science

doi 10.3389/fpls.2024.1390144

714 views

Original Research

Published on 09 Apr 2024

Evaluation of stripe rust resistance and genome-wide association study in wheat varieties derived from the International Center for Agricultural Research in the Dry Areas

in Plant Genetics, Epigenetics and Chromosome Biology

Zhonghao Gao
Xin Wang
Yunxiang Li
Wanwei Hou
Xiaojuan Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1377253

362 views

Original Research

Published on 22 Mar 2024

Comparing genetic differentiation and variation using ISSR and SCoT among Juniper plant markers in Saudi Arabia

in Plant Genetics, Epigenetics and Chromosome Biology

Hatim M. Al-Yasi
Rahmah Al-Qthanin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1356917

796 views

Original Research

Published on 21 Mar 2024

SPT6L, a newly discovered ancestral component of the plant RNA-directed DNA methylation pathway

in Plant Genetics, Epigenetics and Chromosome Biology

Vojtěch Čermák
Tomáš Kašpar
Lukáš Fischer

Frontiers in Plant Science

doi 10.3389/fpls.2024.1372880

1,188 views

Original Research

Published on 21 Mar 2024

The MADS-box genes SOC1 and AGL24 antagonize XAL2 functions in Arabidopsis thaliana root development

in Plant Genetics, Epigenetics and Chromosome Biology

Claudio A. Castañón-Suárez
Maite Arrizubieta
Natalia Castelán-Muñoz
Diana Belén Sánchez-Rodríguez
Carolina Caballero-Cordero
Estephania Zluhan-Martínez
Sandra C. Patiño-Olvera
J.Arturo Arciniega-González
Berenice García-Ponce
María de la Paz Sánchez

Frontiers in Plant Science

doi 10.3389/fpls.2024.1331269

1,452 views

Original Research

Published on 19 Feb 2024

Comparative transcriptomic analysis reveals the molecular mechanism underlying seedling heterosis and its relationship with hybrid contemporary seeds DNA methylation in soybean

in Plant Genetics, Epigenetics and Chromosome Biology

Xiaobo Ren
Liangyu Chen
Lin Deng
Qiuzhu Zhao
Dan Yao
Xueying Li
Weixuan Cong
Zhenyuan Zang
Dingyi Zhao
Miao Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1364284

1,105 views

Original Research

Published on 08 Feb 2024

Regulatory mechanism of heat-active retrotransposons by the SET domain protein SUVH2

in Plant Genetics, Epigenetics and Chromosome Biology

Xiaoying Niu
Zhiyu Ge
Hidetaka Ito

Frontiers in Plant Science

doi 10.3389/fpls.2024.1355626

1,011 views

Original Research

Published on 29 Jan 2024

TaRECQ4 contributes to maintain both homologous and homoeologous recombination during wheat meiosis

in Plant Genetics, Epigenetics and Chromosome Biology

Jeanne Bazile
Isabelle Nadaud
Pauline Lasserre-Zuber
Jonathan Kitt
Romain De Oliveira
Frédéric Choulet
Pierre Sourdille

Frontiers in Plant Science

doi 10.3389/fpls.2023.1342976

1,380 views

Original Research

Published on 19 Jan 2024

Plasticity of parental CENH3 incorporation into the centromeres in wheat × barley F1 hybrids

in Plant Genetics, Epigenetics and Chromosome Biology

Edit Mihók
Dávid Polgári
Andrea Lenykó-Thegze
Diána Makai
Attila Fábián
Mohammad Ali
András Kis
Adél Sepsi
László Sági

Frontiers in Plant Science

doi 10.3389/fpls.2024.1324817

1,061 views

Original Research

Published on 08 Jan 2024

Polyphenol oxidase genes in barley (Hordeum vulgare L.): functional activity with respect to black grain pigmentation

in Plant Genetics, Epigenetics and Chromosome Biology

Anastasiia Y. Glagoleva
Tat’jana V. Kukoeva
Elena K. Khlestkina
Olesya Y. Shoeva

Frontiers in Plant Science

doi 10.3389/fpls.2023.1320770

868 views

Review

Published on 04 Jan 2024

Transposable elements: multifunctional players in the plant genome

in Plant Genetics, Epigenetics and Chromosome Biology

Asmaa H. Hassan
Morad M. Mokhtar
Achraf El Allali

Frontiers in Plant Science

doi 10.3389/fpls.2023.1330127

2,900 views

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Articles

Comprehensive analysis of the mitochondrial genome of Rehmannia glutinosa: insights into repeat-mediated recombinations and RNA editing-induced stop codon acquisition

Insight into chromatin compaction and spatial organization in rice interphase nuclei

Establishing an optimized ATAC-seq protocol for the maize

Gametocidal genes: from a discovery to the application in wheat breeding

Anthocyanin gene enrichment in the distal region of cotton chromosome A07: mechanisms of reproductive organ coloration

Cold stress induces rapid gene-specific changes in the levels of H3K4me3 and H3K27me3 in Arabidopsis thaliana

Evaluation of stripe rust resistance and genome-wide association study in wheat varieties derived from the International Center for Agricultural Research in the Dry Areas

Comparing genetic differentiation and variation using ISSR and SCoT among Juniper plant markers in Saudi Arabia

SPT6L, a newly discovered ancestral component of the plant RNA-directed DNA methylation pathway

The MADS-box genes SOC1 and AGL24 antagonize XAL2 functions in Arabidopsis thaliana root development

Comparative transcriptomic analysis reveals the molecular mechanism underlying seedling heterosis and its relationship with hybrid contemporary seeds DNA methylation in soybean

Regulatory mechanism of heat-active retrotransposons by the SET domain protein SUVH2

TaRECQ4 contributes to maintain both homologous and homoeologous recombination during wheat meiosis

Plasticity of parental CENH3 incorporation into the centromeres in wheat × barley F1 hybrids

Polyphenol oxidase genes in barley (Hordeum vulgare L.): functional activity with respect to black grain pigmentation

Transposable elements: multifunctional players in the plant genome